Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tol-pal system-associated acyl-coa thioesterase | COO09_08450 | Not Available | + | 1773463 - 1773906 | 16739.1 |
| protein tolq | COO09_08455 | Not Available | + | 1773926 - 1774624 | 24780.2 |
| protein tolr | COO09_08460 | Not Available | + | 1774624 - 1775064 | 15371.9 |
| hypothetical protein | COO09_08465 | Not Available | + | 1775061 - 1775873 | 27974.9 |
| tol-pal system beta propeller repeat protein tolb | COO09_08470 | Not Available | + | 1775936 - 1777255 | 47225.9 |
| peptidoglycan-associated lipoprotein | COO09_08475 | Not Available | + | 1777345 - 1777854 | 17854.9 |
| hypothetical protein | COO09_08480 | Not Available | - | 1777969 - 1778418 | 16917.2 |
| hypothetical protein | COO09_08485 | Not Available | - | 1778532 - 1779374 | 30942.3 |
| isoaspartyl peptidase/l-asparaginase | COO09_08490 | Not Available | - | 1779371 - 1780330 | 32596.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | COO09_08495 | Not Available | + | 1780523 - 1781647 | 39702.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.