Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | COO09_08400 | Not Available | + | 1764046 - 1765464 | 52347.6 |
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | COO09_08405 | Not Available | + | 1765718 - 1766977 | 46502.9 |
| alpha-ketoacid dehydrogenase subunit beta | COO09_08410 | Not Available | + | 1767114 - 1768118 | 36231.4 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | COO09_08415 | Not Available | + | 1768124 - 1769419 | 45466.4 |
| yebc/pmpr family dna-binding transcriptional regulator | COO09_08420 | Not Available | + | 1769593 - 1770336 | 26382.0 |
| type ii toxin-antitoxin system rele/pare family toxin | COO09_08425 | Not Available | - | 1770333 - 1770611 | 10803.2 |
| ribbon-helix-helix protein, copg family | COO09_08430 | Not Available | - | 1770608 - 1770877 | 9938.92 |
| crossover junction endodeoxyribonuclease ruvc | COO09_08435 | Not Available | + | 1770999 - 1771496 | 17084.9 |
| holliday junction branch migration protein ruva | COO09_08440 | Not Available | + | 1771493 - 1772092 | 20025.4 |
| holliday junction branch migration dna helicase ruvb | COO09_08445 | Not Available | + | 1772247 - 1773278 | 37565.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.