Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | COO09_08350 | Not Available | - | 1754266 - 1754808 | 19105.2 |
| hypothetical protein | COO09_08355 | Not Available | - | 1754876 - 1755844 | 33899.1 |
| hypothetical protein | COO09_08360 | Not Available | + | 1755980 - 1756321 | 11521.8 |
| ompa family protein | COO09_08365 | Not Available | + | 1756342 - 1757187 | 29404.9 |
| rnd transporter | COO09_08370 | Not Available | + | 1757513 - 1759027 | 53257.7 |
| efflux rnd transporter periplasmic adaptor subunit | COO09_08375 | Not Available | + | 1759024 - 1760445 | 48616.2 |
| abc transporter atp-binding protein | COO09_08380 | Not Available | + | 1760432 - 1761163 | 26644.1 |
| multidrug abc transporter substrate-binding protein | COO09_08385 | Not Available | + | 1761282 - 1762490 | 43348.0 |
| hypothetical protein | COO09_08390 | Not Available | + | 1762658 - 1763338 | 24742.6 |
| dna-binding response regulator | COO09_08395 | Not Available | + | 1763335 - 1764045 | 25972.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.