Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_08295 | Not Available | - | 1743317 - 1744141 | 29737.1 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | COO09_08300 | Not Available | - | 1744312 - 1746180 | 66319.4 |
| methylcrotonoyl-coa carboxylase | COO09_08305 | Not Available | - | 1746347 - 1747948 | 56970.4 |
| acyl-coa dehydrogenase | COO09_08310 | Not Available | - | 1747945 - 1749090 | 41100.3 |
| lysr family transcriptional regulator | COO09_08315 | Not Available | + | 1749184 - 1750083 | 32717.3 |
| duf1428 domain-containing protein | COO09_08320 | Not Available | + | 1750156 - 1750509 | 13247.9 |
| aldehyde-activating protein | COO09_08325 | Not Available | + | 1750644 - 1750994 | 12869.4 |
| duf72 domain-containing protein | COO09_08330 | Not Available | + | 1750994 - 1751794 | 29463.9 |
| urca family protein | COO09_08335 | Not Available | + | 1751998 - 1752324 | 11007.1 |
| llm class flavin-dependent oxidoreductase | COO09_08340 | Not Available | - | 1752485 - 1753513 | 37208.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.