Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipid-transfer protein | COO09_07790 | Not Available | + | 1629603 - 1630784 | 41648.7 |
| nad(p)-dependent oxidoreductase | COO09_07795 | Not Available | + | 1630784 - 1631620 | 28768.5 |
| acid--coa ligase | COO09_07800 | Not Available | + | 1631640 - 1633136 | 53761.6 |
| hypothetical protein | COO09_07805 | Not Available | + | 1633194 - 1633985 | 28447.8 |
| tonb-dependent receptor | COO09_07810 | Not Available | + | 1634358 - 1636637 | 80737.3 |
| ornithine cyclodeaminase | COO09_07815 | Not Available | - | 1636935 - 1637912 | 34563.0 |
| amidohydrolase | COO09_07820 | Not Available | + | 1638151 - 1639512 | 48896.0 |
| amidohydrolase | COO09_07825 | Not Available | + | 1639509 - 1640810 | 44800.8 |
| peptidase m28 | COO09_07830 | Not Available | + | 1640889 - 1642496 | 58381.3 |
| aminotransferase class v-fold plp-dependent enzyme | COO09_07835 | Not Available | + | 1642493 - 1643707 | 43379.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.