Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| llm class f420-dependent oxidoreductase | COO09_07640 | Not Available | + | 1595687 - 1596655 | 35628.4 |
| nuclear transport factor 2 family protein | COO09_07645 | Not Available | + | 1596652 - 1597164 | 19034.5 |
| nadp-dependent oxidoreductase | COO09_07650 | Not Available | + | 1597161 - 1598171 | 35840.3 |
| coa transferase | COO09_07655 | Not Available | + | 1598197 - 1599417 | 43830.2 |
| lysr family transcriptional regulator | COO09_07660 | Not Available | - | 1599441 - 1600331 | 32356.8 |
| coa transferase subunit a | COO09_07665 | Not Available | + | 1600416 - 1601123 | 25272.3 |
| succinyl-coa--3-ketoacid-coa transferase | COO09_07670 | Not Available | + | 1601123 - 1601758 | 22351.9 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | COO09_07675 | Not Available | - | 1601932 - 1603626 | 59824.8 |
| sensor histidine kinase | COO09_07680 | Not Available | - | 1603607 - 1605763 | 77240.8 |
| dna-binding response regulator | COO09_07685 | Not Available | + | 1605934 - 1606653 | 27102.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.