Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_07375 | Not Available | - | 1541392 - 1541625 | 8214.01 |
| hypothetical protein | COO09_07380 | Not Available | - | 1541673 - 1542017 | 12222.7 |
| hypothetical protein | COO09_07385 | Not Available | - | 1542302 - 1542661 | 12839.8 |
| nad synthetase | COO09_07390 | Not Available | - | 1542789 - 1544207 | 49373.0 |
| pyridine nucleotide transhydrogenase | COO09_07395 | Not Available | - | 1544229 - 1544516 | 10023.6 |
| nad(p) transhydrogenase subunit alpha | COO09_07400 | Not Available | - | 1544538 - 1545659 | 38402.2 |
| aa3-type cytochrome c oxidase subunit iv | COO09_07405 | Not Available | - | 1545664 - 1545807 | 4992.14 |
| sigma-54-dependent fis family transcriptional regulator | COO09_07410 | Not Available | + | 1545966 - 1547405 | 51242.8 |
| type iii polyketide synthase | COO09_07415 | Not Available | + | 1547453 - 1548499 | 36720.2 |
| methyltransferase type 12 | COO09_07420 | Not Available | + | 1548499 - 1549209 | 26347.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.