Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | COO09_07325 | Not Available | - | 1531941 - 1532972 | 36386.4 |
| mfs transporter | COO09_07330 | Not Available | - | 1533060 - 1534316 | 44547.5 |
| llm class flavin-dependent oxidoreductase | COO09_07335 | Not Available | - | 1534347 - 1535444 | 39291.8 |
| hypothetical protein | COO09_07340 | Not Available | + | 1535694 - 1536839 | 41787.6 |
| 2-keto-4-pentenoate hydratase | COO09_07345 | Not Available | - | 1536870 - 1537646 | 27227.5 |
| acetolactate synthase, large subunit, biosynthetic type | COO09_07350 | Not Available | - | 1537741 - 1539471 | 61047.6 |
| hypothetical protein | COO09_07355 | Not Available | - | 1539471 - 1539740 | 9610.77 |
| lrp/asnc family transcriptional regulator | COO09_07360 | Not Available | + | 1539871 - 1540338 | 17382.1 |
| thioredoxin trxc | COO09_07365 | Not Available | + | 1540433 - 1540876 | 15560.9 |
| transcription elongation factor greab | COO09_07370 | Not Available | - | 1541000 - 1541395 | 14405.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.