Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific dna-methyltransferase | COO09_07275 | Not Available | - | 1519928 - 1521067 | 42409.7 |
| hypothetical protein | COO09_07280 | Not Available | + | 1521340 - 1521684 | 11879.9 |
| ribonuclease hii | COO09_07285 | Not Available | - | 1521681 - 1522283 | 21357.9 |
| hypothetical protein | COO09_07290 | Not Available | - | 1522294 - 1523298 | 37234.5 |
| duf466 domain-containing protein | COO09_07295 | Not Available | - | 1523487 - 1523681 | 6941.39 |
| carbon starvation protein a | COO09_07300 | Not Available | - | 1523678 - 1525711 | 71331.7 |
| coa transferase | COO09_07305 | Not Available | - | 1525864 - 1527015 | 40334.5 |
| coa transferase | COO09_07310 | Not Available | - | 1527012 - 1528190 | 41586.9 |
| tonb-dependent receptor | COO09_07315 | Not Available | - | 1528280 - 1530640 | 83752.9 |
| taurine dioxygenase | COO09_07320 | Not Available | - | 1530980 - 1531900 | 34519.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.