Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing diguanylate cyclase | COO09_07175 | Not Available | + | 1500317 - 1502134 | 67214.2 |
| peptidase c13 | COO09_07180 | Not Available | + | 1502212 - 1503144 | 33021.7 |
| Trna-gln | Not Available | Not Available | + | 1503209 - 1503283 | Not Available |
| protein capi | COO09_07190 | Not Available | + | 1503399 - 1504397 | 36643.5 |
| hypothetical protein | COO09_07195 | Not Available | + | 1504402 - 1504755 | 11593.8 |
| dienelactone hydrolase family protein | COO09_07200 | Not Available | + | 1504777 - 1505661 | 30954.9 |
| glycosyltransferase | COO09_07205 | Not Available | - | 1505674 - 1506429 | 27692.6 |
| bax inhibitor (bi)-1/ycca family protein | COO09_07210 | Not Available | - | 1506522 - 1507250 | 25772.9 |
| rna 2',3'-cyclic phosphodiesterase | COO09_07215 | Not Available | + | 1507395 - 1507928 | 19882.9 |
| low molecular weight phosphotyrosine protein phosphatase | COO09_07220 | Not Available | - | 1507913 - 1508398 | 17214.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.