Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf541 domain-containing protein | COO09_07125 | Not Available | - | 1487033 - 1487767 | 25525.0 |
| efflux transporter periplasmic adaptor subunit | COO09_07130 | Not Available | + | 1487984 - 1489159 | 40509.9 |
| acrb/acrd/acrf family protein | COO09_07135 | Not Available | + | 1489179 - 1492268 | 111309.0 |
| duf445 domain-containing protein | COO09_07140 | Not Available | + | 1492422 - 1493693 | 45530.8 |
| dna-binding response regulator | COO09_07145 | Not Available | + | 1494031 - 1494771 | 27477.9 |
| peptidoglycan-binding protein | COO09_07150 | Not Available | + | 1494781 - 1495809 | 36173.2 |
| histidine kinase | COO09_07155 | Not Available | + | 1495847 - 1498120 | 81529.2 |
| hypothetical protein | COO09_07160 | Not Available | + | 1498168 - 1498767 | 22135.4 |
| voc family protein | COO09_07165 | Not Available | - | 1498846 - 1499634 | 27638.7 |
| voc family protein | COO09_07170 | Not Available | - | 1499648 - 1500118 | 17245.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.