Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadph:quinone oxidoreductase | COO09_06760 | Not Available | - | 1416555 - 1417553 | 34159.1 |
| 3-isopropylmalate dehydratase small subunit | COO09_06765 | Not Available | - | 1417550 - 1418128 | 20880.1 |
| n-acyl homoserine lactonase family protein | COO09_06770 | Not Available | - | 1418128 - 1418955 | 29136.0 |
| 3-isopropylmalate dehydratase large subunit | COO09_06775 | Not Available | - | 1418952 - 1420391 | 50640.6 |
| response regulator | COO09_06780 | Not Available | + | 1420344 - 1421006 | 23843.5 |
| antibiotic biosynthesis monooxygenase | COO09_06790 | Not Available | + | 1422656 - 1422991 | 12881.4 |
| transcriptional regulator | COO09_06795 | Not Available | - | 1423196 - 1423666 | 17408.3 |
| hypothetical protein | COO09_06800 | Not Available | - | 1424647 - 1424967 | 11631.0 |
| ggdef domain-containing protein | COO09_06805 | Not Available | + | 1425371 - 1426510 | 41648.2 |
| thiamine biosynthesis protein this | COO09_06810 | Not Available | - | 1427247 - 1428290 | 36601.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.