Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-ketosteroid-9-alpha-hydroxylase | COO09_06610 | Not Available | - | 1384369 - 1385496 | 42408.8 |
| arac family transcriptional regulator | COO09_06615 | Not Available | - | 1385700 - 1386557 | 32517.5 |
| hypothetical protein | COO09_06620 | Not Available | - | 1386636 - 1387379 | 25754.8 |
| biphenyl 2,3-dioxygenase | COO09_06625 | Not Available | + | 1387565 - 1388464 | 33429.8 |
| llm class flavin-dependent oxidoreductase | COO09_06630 | Not Available | + | 1388622 - 1389761 | 41557.4 |
| nuclear transport factor 2 family protein | COO09_06635 | Not Available | + | 1389772 - 1390368 | 22853.8 |
| hypothetical protein | COO09_06640 | Not Available | + | 1390365 - 1391168 | 27843.0 |
| hypothetical protein | COO09_06645 | Not Available | + | 1391168 - 1391662 | 17780.3 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | COO09_06650 | Not Available | + | 1391675 - 1394059 | 85184.8 |
| aldo/keto reductase | COO09_06655 | Not Available | - | 1394073 - 1395113 | 37339.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.