Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 12-oxophytodienoate reductase | COO09_06510 | Not Available | - | 1364892 - 1366052 | 42103.0 |
| nuclear transport factor 2 family protein | COO09_06515 | Not Available | - | 1366067 - 1366522 | 17088.4 |
| short-chain dehydrogenase | COO09_06520 | Not Available | + | 1366587 - 1367672 | 38663.9 |
| ethyl tert-butyl ether degradation protein ethd | COO09_06525 | Not Available | - | 1367659 - 1368036 | 14220.9 |
| glyoxalase | COO09_06530 | Not Available | - | 1368033 - 1368458 | 15238.3 |
| aldo/keto reductase | COO09_06535 | Not Available | + | 1368625 - 1369626 | 35762.7 |
| taud/tfda family dioxygenase | COO09_06540 | Not Available | - | 1369676 - 1370758 | 39549.6 |
| nuclear transport factor 2 family protein | COO09_06545 | Not Available | - | 1370619 - 1371053 | 16378.3 |
| class ii aldolase | COO09_06550 | Not Available | - | 1371043 - 1371804 | 27699.1 |
| cytochrome p450 | COO09_06555 | Not Available | + | 1372071 - 1373336 | 47493.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.