Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_06460 | Not Available | - | 1356727 - 1357503 | 27781.7 |
| 3-oxoacyl-acp reductase | COO09_06465 | Not Available | + | 1357701 - 1358453 | 25742.8 |
| duf1330 domain-containing protein | COO09_06470 | Not Available | - | 1358475 - 1358777 | 10873.0 |
| 2,3-dimethylmalate lyase | COO09_06475 | Not Available | - | 1358781 - 1359689 | 32418.3 |
| hypothetical protein | COO09_06480 | Not Available | - | 1359709 - 1360221 | 18088.5 |
| aconitase | COO09_06485 | Not Available | - | 1360211 - 1361506 | 45686.7 |
| nuclear transport factor 2 family protein | COO09_06490 | Not Available | + | 1361760 - 1362308 | 20626.3 |
| 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit cofg | COO09_06495 | Not Available | + | 1362158 - 1363414 | 45130.6 |
| hypothetical protein | COO09_06500 | Not Available | + | 1363511 - 1363801 | 11313.3 |
| arac family transcriptional regulator | COO09_06505 | Not Available | + | 1363935 - 1364879 | 35503.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.