Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase family protein | COO09_06310 | Not Available | + | 1317462 - 1318349 | 32961.6 |
| hypothetical protein | COO09_06315 | Not Available | + | 1318495 - 1320909 | 86516.3 |
| mfs transporter | COO09_06320 | Not Available | + | 1321004 - 1322284 | 45011.3 |
| duf541 domain-containing protein | COO09_06325 | Not Available | - | 1322306 - 1323040 | 25250.9 |
| duf541 domain-containing protein | COO09_06330 | Not Available | + | 1323192 - 1323995 | 27387.9 |
| hypothetical protein | COO09_06335 | Not Available | - | 1323999 - 1325213 | 43831.4 |
| hypothetical protein | COO09_06340 | Not Available | - | 1325176 - 1325667 | 17805.2 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | COO09_06345 | Not Available | + | 1325891 - 1328656 | 98974.8 |
| aconitate hydratase acna | COO09_06350 | Not Available | - | 1328868 - 1331552 | 96319.7 |
| hypothetical protein | COO09_06355 | Not Available | - | 1331693 - 1332127 | 15010.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.