Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_06260 | Not Available | - | 1308408 - 1308878 | 16091.0 |
| hypothetical protein | COO09_06265 | Not Available | - | 1308878 - 1309234 | 13097.9 |
| srpbcc domain-containing protein | COO09_06270 | Not Available | + | 1309316 - 1309843 | 18507.7 |
| duf188 domain-containing protein | COO09_06275 | Not Available | - | 1309851 - 1310309 | 15989.4 |
| dna topoisomerase (atp-hydrolyzing) subunit b | COO09_06280 | Not Available | - | 1310332 - 1312812 | 90550.8 |
| dna replication and repair protein recf | COO09_06285 | Not Available | - | 1312959 - 1314032 | 37750.5 |
| hypothetical protein | COO09_06290 | Not Available | + | 1314196 - 1314894 | 24345.4 |
| tetr/acrr family transcriptional regulator | COO09_06295 | Not Available | - | 1314915 - 1315619 | 25555.2 |
| nuclear transport factor 2 family protein | COO09_06300 | Not Available | + | 1315746 - 1316222 | 17220.3 |
| amidohydrolase | COO09_06305 | Not Available | + | 1316219 - 1317415 | 43784.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.