Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa epimerase | COO09_06160 | Not Available | - | 1292353 - 1292772 | 15079.2 |
| acetyl-coa c-acyltransferase | COO09_06165 | Not Available | - | 1292775 - 1293953 | 40769.1 |
| methylmalonyl-coa carboxyltransferase | COO09_06170 | Not Available | - | 1294050 - 1295582 | 55680.9 |
| xre family transcriptional regulator | COO09_06175 | Not Available | + | 1295850 - 1297283 | 52660.8 |
| penicillin-binding protein | COO09_06180 | Not Available | - | 1297322 - 1299421 | 75085.7 |
| peptide-methionine (r)-s-oxide reductase | COO09_06185 | Not Available | - | 1299830 - 1300225 | 14821.1 |
| hypothetical protein | COO09_06190 | Not Available | - | 1300514 - 1300801 | 10252.7 |
| voc family protein | COO09_06195 | Not Available | + | 1300896 - 1301330 | 15574.1 |
| duf465 domain-containing protein | COO09_06200 | Not Available | - | 1301386 - 1301571 | 7096.48 |
| hypothetical protein | COO09_06205 | Not Available | - | 1301571 - 1301786 | 7857.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.