Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | COO09_06105 | Not Available | - | 1278644 - 1279429 | 28916.7 |
| glucose-6-phosphate dehydrogenase | COO09_06110 | Not Available | + | 1279564 - 1281021 | 53121.5 |
| 6-phosphogluconolactonase | COO09_06115 | Not Available | + | 1281184 - 1281888 | 25038.3 |
| phosphogluconate dehydratase | COO09_06120 | Not Available | + | 1282009 - 1283829 | 64067.8 |
| glucokinase | COO09_06125 | Not Available | + | 1283951 - 1284916 | 33828.7 |
| 2-dehydro-3-deoxyphosphogluconate aldolase | COO09_06130 | Not Available | + | 1284913 - 1285542 | 21256.1 |
| magnesium transporter | COO09_06135 | Not Available | - | 1285532 - 1286203 | 24156.8 |
| opacity protein | COO09_06140 | Not Available | + | 1286435 - 1286986 | 19336.9 |
| biotin synthase biob | COO09_06150 | Not Available | - | 1289173 - 1290189 | 36604.9 |
| methylmalonyl-coa mutase | COO09_06155 | Not Available | - | 1290189 - 1292342 | 77348.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.