Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transporter, opt family | COO09_06050 | Not Available | - | 1263470 - 1265440 | 66580.3 |
| polyhydroxyalkanoate depolymerase | COO09_06055 | Not Available | - | 1266029 - 1267246 | 45165.9 |
| glutathione s-transferase | COO09_06060 | Not Available | + | 1267382 - 1268038 | 24371.3 |
| udp-glucose 4-epimerase gale | COO09_06065 | Not Available | - | 1268063 - 1269067 | 35590.4 |
| dna-binding response regulator | COO09_06070 | Not Available | - | 1269160 - 1269786 | 22928.7 |
| pas domain-containing sensor histidine kinase | COO09_06075 | Not Available | - | 1269786 - 1271849 | 75280.0 |
| dna-binding response regulator | COO09_06085 | Not Available | - | 1272994 - 1273794 | 30336.5 |
| sensor histidine kinase | COO09_06090 | Not Available | - | 1273791 - 1274900 | 41428.3 |
| dicarboxylate/amino acid:cation symporter | COO09_06095 | Not Available | - | 1275057 - 1276334 | 44330.8 |
| tonb-dependent receptor | COO09_06100 | Not Available | - | 1276506 - 1278524 | 71256.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.