Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | COO09_05800 | Not Available | - | 1214484 - 1215341 | 32483.9 |
| sarcosine oxidase subunit gamma | COO09_05805 | Not Available | - | 1215364 - 1215822 | 16167.5 |
| sarcosine oxidase subunit alpha family protein | COO09_05810 | Not Available | - | 1215869 - 1218826 | 105406.0 |
| sarcosine oxidase subunit delta | COO09_05815 | Not Available | - | 1218823 - 1219074 | 9319.8 |
| sarcosine oxidase subunit beta family protein | COO09_05820 | Not Available | - | 1219086 - 1220342 | 45166.1 |
| glxa family transcriptional regulator | COO09_05825 | Not Available | + | 1220419 - 1221396 | 35770.9 |
| trypsin | COO09_05830 | Not Available | - | 1221616 - 1222302 | 23511.8 |
| protein usg | COO09_05835 | Not Available | - | 1222678 - 1222947 | 10453.4 |
| hypothetical protein | COO09_05840 | Not Available | - | 1222949 - 1223239 | 10180.3 |
| co-chaperone groes | COO09_05845 | Not Available | + | 1223422 - 1223736 | 11414.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.