Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphomethylpyrimidine synthase thic | COO09_05585 | Not Available | - | 1149555 - 1151414 | 67981.2 |
| lycopene cyclase | COO09_05590 | Not Available | + | 1151854 - 1152996 | 41604.3 |
| tigr00730 family rossman fold protein | COO09_05595 | Not Available | + | 1152993 - 1153577 | 20511.1 |
| hypothetical protein | COO09_05605 | Not Available | + | 1154125 - 1154445 | 11186.1 |
| adp-forming succinate--coa ligase subunit beta | COO09_05610 | Not Available | + | 1154598 - 1155797 | 42399.6 |
| electron transfer flavoprotein subunit beta | COO09_05615 | Not Available | + | 1155980 - 1156729 | 26547.5 |
| electron transfer flavoprotein subunit alpha/fixb family protein | COO09_05620 | Not Available | + | 1156726 - 1157655 | 31421.5 |
| gaf domain-containing protein | COO09_05625 | Not Available | + | 1157793 - 1158314 | 18704.4 |
| fad-binding oxidoreductase | COO09_05630 | Not Available | - | 1158360 - 1159532 | 42227.4 |
| uracil-dna glycosylase | COO09_05635 | Not Available | - | 1159928 - 1161301 | 51147.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.