Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | COO09_05535 | Not Available | + | 1143570 - 1144280 | 26187.5 |
| pyridoxamine 5'-phosphate oxidase | COO09_05540 | Not Available | + | 1144345 - 1144794 | 16828.8 |
| permease | COO09_05545 | Not Available | - | 1144910 - 1145455 | 19769.6 |
| hypothetical protein | COO09_05550 | Not Available | - | 1145593 - 1146138 | 19960.6 |
| glutathione s-transferase family protein | COO09_05555 | Not Available | - | 1146237 - 1146887 | 24010.6 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | COO09_05560 | Not Available | + | 1147348 - 1147605 | 9372.07 |
| txe/yoeb family addiction module toxin | COO09_05565 | Not Available | + | 1147602 - 1147868 | 10368.4 |
| type ii toxin-antitoxin system pemk/mazf family toxin | COO09_05570 | Not Available | - | 1147877 - 1148203 | 11503.0 |
| duf3018 domain-containing protein | COO09_05575 | Not Available | - | 1148200 - 1148430 | 8885.4 |
| hypothetical protein | COO09_05580 | Not Available | - | 1148516 - 1149181 | 24565.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.