Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| competence protein comec | COO09_05485 | Not Available | - | 1131136 - 1133211 | 72367.7 |
| glutamate--trna ligase | COO09_05490 | Not Available | + | 1133361 - 1134818 | 53289.1 |
| citrate synthase | COO09_05495 | Not Available | + | 1134874 - 1136157 | 47270.6 |
| type ii toxin-antitoxin system rele/pare family toxin | COO09_05500 | Not Available | - | 1136208 - 1136501 | 10780.0 |
| ribbon-helix-helix protein, copg family | COO09_05505 | Not Available | - | 1136489 - 1136761 | 10313.9 |
| sensor histidine kinase | COO09_05510 | Not Available | - | 1136829 - 1138187 | 48234.7 |
| duf2336 domain-containing protein | COO09_05515 | Not Available | - | 1138184 - 1139299 | 39997.0 |
| hypothetical protein | COO09_05520 | Not Available | - | 1139341 - 1140564 | 42845.5 |
| hypothetical protein | COO09_05525 | Not Available | - | 1140674 - 1140970 | 9879.88 |
| hypothetical protein | COO09_05530 | Not Available | + | 1141055 - 1143487 | 85981.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.