Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_05330 | Not Available | + | 1096039 - 1097181 | 41300.2 |
| phosphoribosylglycinamide synthetase | COO09_05335 | Not Available | + | 1097269 - 1098297 | 38044.8 |
| nucleotidyl transferase | COO09_05340 | Not Available | + | 1098284 - 1099108 | 28434.7 |
| dehydratase | COO09_05345 | Not Available | - | 1099115 - 1099567 | 16787.2 |
| coa ester lyase | COO09_05350 | Not Available | - | 1099655 - 1100494 | 28837.5 |
| antibiotic biosynthesis monooxygenase | COO09_05355 | Not Available | - | 1100558 - 1100863 | 10634.9 |
| general stress protein | COO09_05360 | Not Available | + | 1101022 - 1101504 | 17977.4 |
| enoyl-coa hydratase/isomerase family protein | COO09_05365 | Not Available | + | 1101545 - 1102489 | 33322.4 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit beta | COO09_05370 | Not Available | - | 1102612 - 1103667 | 37308.3 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | COO09_05375 | Not Available | - | 1103664 - 1105511 | 67168.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.