Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf979 domain-containing protein | COO09_05275 | Not Available | - | 1081533 - 1082477 | 32651.1 |
| duf969 domain-containing protein | COO09_05280 | Not Available | - | 1082474 - 1083133 | 23333.2 |
| 5-oxoprolinase | COO09_05285 | Not Available | - | 1083255 - 1086830 | 124273.0 |
| duf1905 domain-containing protein | COO09_05295 | Not Available | - | 1087669 - 1087986 | 11370.6 |
| amidohydrolase family protein | COO09_05300 | Not Available | - | 1088047 - 1089381 | 45848.1 |
| abc transporter | COO09_05305 | Not Available | - | 1089507 - 1091090 | 55319.4 |
| peptidylprolyl isomerase | COO09_05310 | Not Available | + | 1091255 - 1091911 | 22890.0 |
| malonyl-coa synthase | COO09_05315 | Not Available | - | 1092021 - 1093514 | 53207.8 |
| polysaccharide biosynthesis protein | COO09_05320 | Not Available | - | 1093536 - 1094843 | 44950.9 |
| glycosyltransferase | COO09_05325 | Not Available | - | 1094840 - 1095964 | 39784.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.