Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus dicambivorans str. Ndbn-20m
Accession NumberNWUF00000000.1
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartyl beta-hydroxylase | COO09_04970 | Not Available | - | 1015633 - 1016598 | 34147.3 |
| hypothetical protein | COO09_04975 | Not Available | - | 1016641 - 1016895 | 9256.26 |
| proline hydroxylase | COO09_04980 | Not Available | + | 1016973 - 1017686 | 25767.6 |
| hypothetical protein | COO09_04985 | Not Available | - | 1017755 - 1018015 | 9227.11 |
| sulfotransferase | COO09_04990 | Not Available | - | 1018090 - 1020081 | 73318.4 |
| hypothetical protein | COO09_04995 | Not Available | - | 1020215 - 1023286 | 108532.0 |
| hypothetical protein | COO09_05000 | Not Available | + | 1023544 - 1024065 | 18727.6 |
| peptidase | COO09_05005 | Not Available | - | 1024103 - 1025053 | 32981.9 |
| duf2093 domain-containing protein | COO09_05010 | Not Available | - | 1025092 - 1025289 | 7046.48 |
| exodeoxyribonuclease vii large subunit | COO09_05015 | Not Available | - | 1025306 - 1026796 | 53920.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.