Paenibacillus oryzae str. 1DrF-4

rodfacultative aerobe/anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus oryzae str. 1DrF-4 is a Gram-positive, rod-shaped bacterium characterized by its ability to form spores and its facultative aerobic or anaerobic metabolism. This organism's Gram-positive nature indicates a thick peptidoglycan layer in its cell wall, which is a common feature among members of the Bacilli class. The rod shape is typical of many Bacillus species and may contribute to its motility and ecological adaptability. As a spore-forming bacterium, Paenibacillus oryzae str. 1DrF-4 can survive in unfavorable environmental conditions by entering a dormant state, which enhances its resilience and potential for long-term survival in various habitats. The facultative nature of its oxygen requirement allows it to thrive in both aerobic and anaerobic environments, suggesting a versatile metabolic capacity that could enable it to colonize a range of ecological niches. The ability to adapt to varying oxygen levels may provide insights into its ecological roles, particularly in soil and rhizosphere environments where oxygen availability can fluctuate. This adaptability could be beneficial for interactions with plant roots or other microorganisms, potentially influencing soil health and plant growth. Thus, Paenibacillus oryzae str. 1DrF-4 may play a significant role in nutrient cycling and the maintenance of microbial diversity in its habitat.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus oryzae
Strain1DrF-4

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus oryzae str. 1DrF-4


Gene Summary

Adenine Count

1494403 bp

Thymine Count

1490377 bp

Guanine Count

1472067 bp

Cytosine Count

1448354 bp

Genome Length

5905968 bp

Protein-coding Genes

5020 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinA7K91_22905Not Available+2420 - 312727313.7
transposaseA7K91_21135Not Available-5305 - 592523877.7
hypothetical proteinA7K91_21140Not Available-5973 - 642817428.1
transposaseA7K91_10970Not Available-6553 - 737431434.1
transposaseA7K91_10975Not Available-7422 - 771811831.1
hypothetical proteinA7K91_21980Not Available-7795 - 927055199.7
hypothetical proteinA7K91_10965Not Available-9312 - 1059548579.4
transposaseA7K91_15315Not Available-10932 - 1212244948.7
group ii intron reverse transcriptase/maturaseA7K91_20160Not Available-12444 - 1384454035.8
hypothetical proteinA7K91_19010Not Available-13981 - 1449320721.8

Displaying genes 1 – 10 of 5020 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites