Pelobium manganitolerans str. YS-25

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pelobium

Description

Pelobium manganitolerans strain YS-25 is a Gram-negative, rod-shaped bacterium that exhibits facultative aerobe and anaerobe characteristics, thriving optimally at a temperature of 29.0°C. This organism's Gram-negative nature suggests the presence of an outer membrane, which may contribute to its adaptability in varying environmental conditions, including both aerobic and anaerobic environments. The rod shape is typical for many bacteria, potentially influencing its motility and nutrient uptake strategies. The facultative lifestyle of P. manganitolerans str. YS-25 implies that it can switch between aerobic respiration and fermentation, depending on the availability of oxygen. This metabolic versatility may be advantageous in fluctuating ecological niches, allowing it to exploit a range of substrates. Given its specific adaptation to a moderate temperature and variable oxygen levels, P. manganitolerans str. YS-25 could play a significant role in biogeochemical cycling, particularly in environments where manganese is prevalent. The ability to tolerate manganese may suggest potential applications in bioremediation or bioleaching processes, where the microbe could contribute to the mobilization of this metal in various ecosystems. Further research into its metabolic pathways and ecological interactions could illuminate more about its role in microbial communities and environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPelobium
SpeciesPelobium manganitolerans
StrainYS-25

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelobium manganitolerans str. YS-25


Gene Summary

Adenine Count

1159025 bp

Thymine Count

1143484 bp

Guanine Count

824805 bp

Cytosine Count

805451 bp

Genome Length

3932770 bp

Protein-coding Genes

3341 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+50 - 1576Not Available
23s ribosomal rnaNot AvailableNot Available+334 - 3231Not Available
5s ribosomal rnaNot AvailableNot Available+592 - 709Not Available
restriction endonucleaseBCY91_00015Not Available+2192 - 297130005.0
dpnd proteinBCY91_00020Not Available+2958 - 31286770.96
dna methylase n-4BCY91_00025Not Available+3155 - 402133251.9
5s ribosomal rnaNot AvailableNot Available+3341 - 3452Not Available
5s ribosomal rnaNot AvailableNot Available+3344 - 3455Not Available
antibiotic biosynthesis monooxygenaseBCY91_00035Not Available+5188 - 548110521.7
damage-inducible protein dinbBCY91_00040Not Available-6259 - 675919013.8

Displaying genes 1 – 10 of 3392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites