Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_16985 | Not Available | - | 6382 - 7497 | 42548.3 |
| hypothetical protein | A5893_16990 | Not Available | - | 7676 - 8173 | 19074.2 |
| cyclic nucleotide-binding protein | A5893_16995 | Not Available | - | 8251 - 8820 | 21535.0 |
| hypothetical protein | A5893_17000 | Not Available | - | 9062 - 9421 | 13713.3 |
| hypothetical protein | A5893_17005 | Not Available | - | 9430 - 9810 | 14394.3 |
| serine hydrolase | A5893_17010 | Not Available | - | 10012 - 11067 | 39368.3 |
| dna-binding protein | A5893_17015 | Not Available | - | 11214 - 12341 | 43587.8 |
| hypothetical protein | A5893_17020 | Not Available | - | 12534 - 13376 | 31224.8 |
| hypothetical protein | A5893_17025 | Not Available | - | 13449 - 13850 | 15767.9 |
| hypothetical protein | A5893_17030 | Not Available | - | 14229 - 14879 | 25104.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
