Desulfuromonas sp. DDH964

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Desulfuromonadales

Family

Desulfuromonadaceae

Genus

Desulfuromonas

Description

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderDesulfuromonadales
FamilyDesulfuromonadaceae
GenusDesulfuromonas
SpeciesDesulfuromonas sp. DDH964
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatunderground Soudan iron mine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfuromonas sp. DDH964

Accession NumberNZ_CP015080.1

Gene Summary

Adenine Count

740912 bp

Thymine Count

741428 bp

Guanine Count

1222938 bp

Cytosine Count

1219374 bp

Genome Length

3924652 bp

Protein-coding Genes

3604 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rlua family pseudouridine synthaseDBW_RS10310Not Available-2233849 - 223477532892.0
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabDBW_RS10315Not Available-2234772 - 223606145653.2
trna 2-thiouridine(34) synthase mnmaDBW_RS10320Not Available-2236058 - 223714340519.3
fe-s cluster assembly scaffold protein nifuDBW_RS10325Not Available-2237237 - 223761113303.7
cysteine desulfurase nifsDBW_RS10330Not Available-2237720 - 223893143625.6
rrf2 family transcriptional regulatorDBW_RS10335Not Available-2238949 - 223940116759.3
serine o-acetyltransferaseDBW_RS10340Not Available-2239403 - 224010726064.2
atp-binding proteinDBW_RS10345Not Available-2240317 - 224236875951.7
threonine ammonia-lyase, biosyntheticDBW_RS10350Not Available-2242591 - 224409955299.3
fumarate hydrataseDBW_RS10355Not Available+2244364 - 224598959383.5

Displaying genes 2111 – 2120 of 3664 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

234 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 234 metabolites