Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK607 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Collimonas sp. OK607
Accession NumberFOKF00000000.1
Gene Summary
Adenine Count
1184390 bp
Thymine Count
1179281 bp
Guanine Count
1513161 bp
Cytosine Count
1497706 bp
Genome Length
5374538 bp
Protein-coding Genes
4983 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein (porin) | SAMN04515620_1019 | Not Available | + | 8108 - 9151 | 37000.4 |
| lysr family transcriptional regulator, nitrogen assimilation regulatory protein | SAMN04515620_10110 | Not Available | - | 9164 - 10087 | 34187.6 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN04515620_10111 | Not Available | + | 10235 - 11104 | 31541.9 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN04515620_10112 | Not Available | - | 11152 - 12060 | 31853.4 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase | SAMN04515620_10113 | Not Available | - | 12076 - 12765 | 23960.1 |
| 4-oxalomesaconate hydratase | SAMN04515620_10114 | Not Available | - | 12775 - 13815 | 38841.6 |
| 4-oxalomesaconate tautomerase | SAMN04515620_10115 | Not Available | - | 13817 - 14950 | 39371.8 |
| lysr family transcriptional regulator, regulator for genes of the gallate degradation pathway | SAMN04515620_10116 | Not Available | + | 15089 - 16297 | 43120.9 |
| hypothetical protein | SAMN04515620_10117 | Not Available | - | 16653 - 17570 | 33601.3 |
| hypothetical protein | SAMN04515620_10118 | Not Available | - | 17567 - 18022 | 16420.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.