Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK607 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Collimonas sp. OK607
Accession NumberFOKF00000000.1
Gene Summary
Adenine Count
1184390 bp
Thymine Count
1179281 bp
Guanine Count
1513161 bp
Cytosine Count
1497706 bp
Genome Length
5374538 bp
Protein-coding Genes
4983 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04515620_1756 | Not Available | + | 5314447 - 5314794 | 13424.4 |
| integrase core domain-containing protein | SAMN04515620_1757 | Not Available | - | 5315474 - 5315735 | 10227.8 |
| alanine dehydrogenase/pnt, c-terminal domain | SAMN04515620_1761 | Not Available | - | 5315736 - 5316427 | 23813.0 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04515620_1762 | Not Available | + | 5316657 - 5317142 | 17760.1 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN04515620_1763 | Not Available | + | 5317135 - 5318286 | 42328.0 |
| protein of unknown function | SAMN04515620_1764 | Not Available | + | 5318630 - 5318902 | 9406.16 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04515620_1765 | Not Available | + | 5319071 - 5320582 | 53783.8 |
| uncharacterized membrane protein yccc | SAMN04515620_1766 | Not Available | + | 5320595 - 5322697 | 76281.4 |
| protein of unknown function | SAMN04515620_1767 | Not Available | + | 5322700 - 5322903 | 7712.89 |
| rnd family efflux transporter, mfp subunit | SAMN04515620_1768 | Not Available | + | 5322934 - 5323827 | 32270.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.