Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK607 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Collimonas sp. OK607
Accession NumberFOKF00000000.1
Gene Summary
Adenine Count
1184390 bp
Thymine Count
1179281 bp
Guanine Count
1513161 bp
Cytosine Count
1497706 bp
Genome Length
5374538 bp
Protein-coding Genes
4983 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN04515620_101180 | Not Available | + | 186902 - 187549 | 24456.2 |
| 3-isopropylmalate dehydrogenase | SAMN04515620_101181 | Not Available | + | 187613 - 188683 | 38268.1 |
| aspartate semialdehyde dehydrogenase | SAMN04515620_101182 | Not Available | + | 188752 - 189888 | 41055.0 |
| pilus assembly protein fimv | SAMN04515620_101183 | Not Available | + | 190164 - 193130 | 100808.0 |
| trna pseudouridine38-40 synthase | SAMN04515620_101184 | Not Available | + | 193228 - 194061 | 31140.3 |
| phosphoribosylanthranilate isomerase | SAMN04515620_101185 | Not Available | + | 194170 - 194847 | 24200.1 |
| tryptophan synthase beta chain | SAMN04515620_101186 | Not Available | + | 194859 - 196124 | 45872.7 |
| tryptophan synthase, alpha chain | SAMN04515620_101187 | Not Available | + | 196221 - 197018 | 27990.8 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN04515620_101188 | Not Available | + | 197132 - 198004 | 31920.3 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN04515620_101189 | Not Available | + | 198072 - 199382 | 47322.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.