Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK607 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Collimonas sp. OK607
Accession NumberFOKF00000000.1
Gene Summary
Adenine Count
1184390 bp
Thymine Count
1179281 bp
Guanine Count
1513161 bp
Cytosine Count
1497706 bp
Genome Length
5374538 bp
Protein-coding Genes
4983 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ala-trna(pro) deacylase | SAMN04515620_101160 | Not Available | + | 163797 - 164267 | 17798.0 |
| hypothetical protein | SAMN04515620_101161 | Not Available | + | 164281 - 164766 | 17512.4 |
| 2-oxoisovalerate dehydrogenase e1 component alpha subunit | SAMN04515620_101162 | Not Available | + | 164906 - 166138 | 45288.9 |
| branched-chain alpha-keto acid dehydrogenase e1 component | SAMN04515620_101163 | Not Available | + | 166141 - 167187 | 37946.3 |
| branched-chain alpha-keto acid dehydrogenase e2 component | SAMN04515620_101164 | Not Available | + | 167184 - 168464 | 45356.7 |
| membrane carboxypeptidase (penicillin-binding protein) | SAMN04515620_101165 | Not Available | + | 168637 - 171657 | 112195.0 |
| trap transporter solute receptor, taxi family | SAMN04515620_101166 | Not Available | + | 171728 - 173182 | 53222.1 |
| protein of unknown function | SAMN04515620_101167 | Not Available | + | 173366 - 173830 | 15950.8 |
| protein of unknown function | SAMN04515620_101168 | Not Available | + | 173843 - 175072 | 41358.3 |
| lysm domain-containing protein | SAMN04515620_101169 | Not Available | - | 175171 - 175914 | 26115.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.