Rodentibacter caecimuris

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter caecimuris is a Gram-negative, rod-shaped bacterium that is part of the microbiota associated with rodents. This microbe is characterized by its cylindrical morphology, which is typical of many members of the Gammaproteobacteria class. The Gram-negative nature of R. caecimuris indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, a feature that influences its interactions within the host environment and its response to antibiotics. While the specific ecological roles and interactions of R. caecimuris within the rodent gut microbiome remain to be fully elucidated, its rod shape may contribute to competitive advantages in nutrient acquisition and colonization of the intestinal niche. The presence of such bacteria within rodent species could also have implications for understanding host-microbe interactions, particularly regarding how these microbes may influence digestion, metabolism, or even the overall health of their host. Future studies could provide insights into the symbiotic relationships R. caecimuris maintains within its rodent hosts and how it may play a role in the complex microbial communities that exist in the gastrointestinal tract of these animals. This highlights the potential importance of R. caecimuris in maintaining gut health and stability in its rodent hosts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter caecimuris
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter caecimuris

Accession NumberMLAA00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1956 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinBKG89_00820Not Available-175549 - 17611822219.3
hypothetical proteinBKG89_00825Not Available-176713 - 179679111550.0
hypothetical proteinBKG89_00830Not Available-179645 - 18103954747.1
trigger factorBKG89_00835Not Available+181106 - 18223041809.6
atp-dependent clp endopeptidase, proteolytic subunit clppBKG89_00840Not Available+182410 - 18299121535.1
atp-dependent protease atp-binding subunit clpxBKG89_00845Not Available+183000 - 18425946585.8
fis family transcriptional regulatorBKG89_00850Not Available-184454 - 18475011081.5
trna dihydrouridine synthase dusbBKG89_00855Not Available-184744 - 18572436555.3
rod shape-determining protein mredBKG89_00860Not Available-185893 - 18638119120.3
rod shape-determining protein mrecBKG89_00865Not Available-186381 - 18743339014.8

Displaying genes 231 – 240 of 2055 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites