Rodentibacter caecimuris

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter caecimuris is a Gram-negative, rod-shaped bacterium that is part of the microbiota associated with rodents. This microbe is characterized by its cylindrical morphology, which is typical of many members of the Gammaproteobacteria class. The Gram-negative nature of R. caecimuris indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, a feature that influences its interactions within the host environment and its response to antibiotics. While the specific ecological roles and interactions of R. caecimuris within the rodent gut microbiome remain to be fully elucidated, its rod shape may contribute to competitive advantages in nutrient acquisition and colonization of the intestinal niche. The presence of such bacteria within rodent species could also have implications for understanding host-microbe interactions, particularly regarding how these microbes may influence digestion, metabolism, or even the overall health of their host. Future studies could provide insights into the symbiotic relationships R. caecimuris maintains within its rodent hosts and how it may play a role in the complex microbial communities that exist in the gastrointestinal tract of these animals. This highlights the potential importance of R. caecimuris in maintaining gut health and stability in its rodent hosts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter caecimuris
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter caecimuris

Accession NumberMLAA00000000.1

Gene Summary

Adenine Count

725860 bp

Thymine Count

730415 bp

Guanine Count

439033 bp

Cytosine Count

431353 bp

Genome Length

2326661 bp

Protein-coding Genes

1956 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmoBKG89_07360Not Available-1614979 - 161570727390.2
1,4-dihydroxy-2-naphthoate polyprenyltransferaseBKG89_07365Not Available+1615769 - 161668032974.2
ribonuclease e activity regulator rraaBKG89_07370Not Available+1616725 - 161722518131.2
transporterBKG89_07375Not Available+1617406 - 161879149816.6
hypothetical proteinBKG89_07390Not Available+1622644 - 162340229437.3
transcriptional regulatorBKG89_07395Not Available+1623399 - 162373712668.4
hypothetical proteinBKG89_07400Not Available+1623741 - 162478138017.4
lysr family transcriptional regulatorBKG89_07405Not Available-1625068 - 162596734799.4
acetyl-coa--acetoacetyl-coa transferase subunit alphaBKG89_07410Not Available+1626281 - 162693122988.1
succinyl-coa--3-ketoacid-coa transferaseBKG89_07415Not Available+1626943 - 162761723885.1

Displaying genes 1501 – 1510 of 2055 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites