Thermodesulfatator autotrophicus str. S606

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Thermodesulfobacteria

Order

Thermodesulfobacteriales

Family

Thermodesulfatatoraceae

Genus

Thermodesulfatator

Description

Thermodesulfatator autotrophicus str. S606 is a Gram-negative, rod-shaped bacterium that thrives under anaerobic conditions and exhibits autotrophic, lithotrophic, and chemotrophic metabolic capabilities. This microbe has an optimal growth temperature of 45.0°C, suggesting a preference for moderately thermophilic environments. As an autotroph, T. autotrophicus str. S606 utilizes inorganic compounds as energy sources, which aligns with its classification as a lithotroph. This metabolic flexibility allows the organism to play a significant role in biogeochemical cycles, particularly in environments rich in inorganic substances. The anaerobic nature of T. autotrophicus str. S606 further emphasizes its potential ecological niche, likely inhabiting reduced environments such as deep-sea hydrothermal vents, sulfate-rich hot springs, or other geothermal sites where organic carbon sources are scarce. The ability to utilize inorganic substrates not only enables this bacterium to thrive in extreme conditions but also suggests its involvement in the sulfur cycle, possibly facilitating the reduction of sulfate to sulfide. Such traits make T. autotrophicus str. S606 a key player in the microbial ecology of extreme environments, contributing to the overall metabolic processes that sustain these unique ecosystems. The interplay between its autotrophic metabolism and anaerobic lifestyle highlights the adaptability of microbial life in extreme conditions, providing insights into the evolutionary strategies that allow life to persist in environments previously thought to be uninhabitable.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassThermodesulfobacteria
OrderThermodesulfobacteriales
FamilyThermodesulfatatoraceae
GenusThermodesulfatator
SpeciesThermodesulfatator autotrophicus
StrainS606

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Image of Thermodesulfatator autotrophicus str. S606
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature45
Temperature rangethermophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceautotroph; lithotroph; chemotroph
PathogenicityNot Available

Genome Summary

Thermodesulfatator autotrophicus str. S606


Gene Summary

Adenine Count

647602 bp

Thymine Count

645247 bp

Guanine Count

483800 bp

Cytosine Count

494314 bp

Genome Length

2270963 bp

Protein-coding Genes

2117 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinTH606_00010Q1C2S9-911 - 262662848.2
Ncrna_class:srp_rnaNot AvailableNot Available+3336 - 3434Not Available
hypothetical proteinTH606_00015Not Available-2847 - 333818840.0
chromosome partitioning protein parbTH606_00020Q72H91-3338 - 419231987.9
chromosome partitioning protein paraTH606_00025Q9K5N0-4179 - 495228148.7
hypothetical proteinTH606_00030Q9SRE0-4955 - 571328193.6
hypothetical proteinTH606_00035O26091+5712 - 641926342.5
hypothetical proteinTH606_00040A6Q1H0+6470 - 721628340.4
gtpase eraTH606_00045Q39T84+7191 - 811434842.8
hypothetical proteinTH606_00050Q1D2K0+8248 - 915633266.5

Displaying genes 1 – 10 of 2170 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

145 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da

Displaying 1–10 of 145 metabolites