Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Hv1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1537948 bp
Thymine Count
1537333 bp
Guanine Count
891789 bp
Cytosine Count
928197 bp
Genome Length
4895269 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | AQF98_00500 | Not Available | + | 90895 - 92808 | 72808.7 |
| hypothetical protein | AQF98_00505 | Not Available | + | 92838 - 93176 | 13146.7 |
| hypothetical protein | AQF98_00510 | Not Available | + | 93173 - 93376 | 7865.54 |
| Portal protein | AQF98_00515 | Not Available | + | 93376 - 94848 | 54742.7 |
| Putative major head protein | AQF98_00520 | B0ZSF3 | + | 95403 - 97355 | 70538.5 |
| Putative recombinase | AQF98_00525 | Not Available | + | 97393 - 97764 | 12563.0 |
| hypothetical protein | AQF98_00530 | Not Available | + | 97771 - 98103 | 12147.3 |
| hypothetical protein | AQF98_00535 | Not Available | + | 98103 - 98579 | 18182.7 |
| hypothetical protein | AQF98_00540 | Not Available | + | 98610 - 98804 | 7194.65 |
| Major tail sheath protein | AQF98_00545 | Q6QIB0 | + | 98804 - 100216 | 49523.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.