Oerskovia sp. Root918

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Cellulomonadaceae

Genus

Oerskovia

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyCellulomonadaceae
GenusOerskovia
SpeciesOerskovia sp. Root918
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oerskovia sp. Root918

Accession NumberLMJG00000000.1

Gene Summary

Adenine Count

619560 bp

Thymine Count

623484 bp

Guanine Count

1636513 bp

Cytosine Count

1607248 bp

Genome Length

4486924 bp

Protein-coding Genes

3594 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
preprotein translocase subunit secyASE27_15070P43416+4126158 - 412745346570.9
adenylate kinaseASE27_15075B2GJ13+4127513 - 412807019999.6
methionine aminopeptidaseASE27_15080Not Available+4128093 - 412892929145.4
translation initiation factor if-1ASE27_15085Q6AD17+4129238 - 41294598364.32
50s ribosomal protein l36ASE27_15090A6W5W2+4129545 - 41296584403.71
30s ribosomal protein s13ASE27_15095C5C0G3+4129873 - 413024714000.1
30s ribosomal protein s11ASE27_15100A6W5W4+4130351 - 413075514327.2
dna-directed rna polymerase subunit alphaASE27_15105C5C0G1+4130910 - 413192937080.8
50s ribosomal protein l17ASE27_15110C5C0G0+4131986 - 413248618085.9
alpha/beta hydrolaseASE27_15115Not Available+4132750 - 413348725434.6

Displaying genes 3371 – 3380 of 3676 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

211 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00007131,5-anhydro-D-fructoseC6H10O5Chemical structure of 1,5-anhydro-D-fructoseNot available
Average162.1406Da
Monoisotopic162.05282343Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da

Displaying 1–10 of 211 metabolites