Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | ASC92_00150 | Not Available | + | 35701 - 36624 | 33868.4 |
| crossover junction endodeoxyribonuclease ruvc | ASC92_00155 | Not Available | - | 36972 - 37520 | 19037.0 |
| hypothetical protein | ASC92_00160 | Not Available | + | 37668 - 39743 | 75828.7 |
| phosphatidate cytidylyltransferase | ASC92_00165 | Not Available | - | 39759 - 40748 | 36820.7 |
| glycerol acyltransferase | ASC92_00170 | Not Available | - | 41029 - 41907 | 31509.1 |
| hypothetical protein | ASC92_00175 | Not Available | + | 41917 - 42333 | 15345.2 |
| monofunctional biosynthetic peptidoglycan transglycosylase | ASC92_00180 | Not Available | - | 42299 - 43042 | 27234.2 |
| shikimate dehydrogenase | ASC92_00185 | Not Available | - | 43039 - 43899 | 29534.6 |
| energy transducer tonb | ASC92_00190 | Not Available | - | 43925 - 44779 | 31312.2 |
| ribonuclease ii | ASC92_00195 | Not Available | - | 44829 - 46889 | 74166.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.