Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | ASC92_00105 | Not Available | + | 23860 - 25038 | 43543.5 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | ASC92_00110 | Not Available | + | 25046 - 27166 | 73947.0 |
| cell division protein ftsw | ASC92_00115 | Not Available | + | 27163 - 28461 | 47005.1 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | ASC92_00120 | Not Available | + | 28458 - 29522 | 37334.4 |
| udp-n-acetylmuramate--alanine ligase | ASC92_00125 | Not Available | + | 29519 - 30994 | 51191.5 |
| d-alanine--d-alanine ligase | ASC92_00130 | Not Available | + | 30991 - 31962 | 34797.7 |
| cell division protein ftsq | ASC92_00135 | Not Available | + | 31966 - 32754 | 28886.7 |
| cell division protein ftsa | ASC92_00140 | Not Available | + | 32783 - 34012 | 43603.2 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 33509 - 33866 | Not Available |
| cell division protein ftsz | ASC92_00145 | Not Available | + | 34183 - 35394 | 41709.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.