Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trar | ASC92_00055 | Not Available | + | 12797 - 13423 | 22964.3 |
| hypothetical protein | ASC92_00060 | Not Available | + | 13473 - 15146 | 60455.1 |
| atp-dependent protease subunit hslv | ASC92_00065 | Not Available | + | 15202 - 15747 | 19402.3 |
| atp-dependent protease atp-binding subunit hslu | ASC92_00070 | Not Available | + | 15750 - 17078 | 48993.9 |
| division/cell wall cluster transcriptional repressor mraz | ASC92_00075 | Not Available | + | 17350 - 17778 | 15838.0 |
| ribosomal rna small subunit methyltransferase h | ASC92_00080 | Not Available | + | 17787 - 18710 | 33769.2 |
| cell division protein ftsl | ASC92_00085 | Not Available | + | 18712 - 19077 | 13405.5 |
| cell division protein | ASC92_00090 | Not Available | + | 19074 - 20828 | 63819.9 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | ASC92_00095 | Not Available | + | 20831 - 22411 | 54768.4 |
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligase | ASC92_00100 | Not Available | + | 22408 - 23844 | 50286.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.