Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_00005 | Not Available | + | 1643 - 1843 | 7272.34 |
| 2-hydroxychromene-2-carboxylate isomerase | ASC92_00010 | Not Available | + | 4282 - 4917 | 23273.6 |
| diaminopimelate epimerase | ASC92_00015 | Not Available | + | 4925 - 5800 | 31410.6 |
| hypothetical protein | ASC92_00020 | Not Available | + | 5797 - 6501 | 26051.9 |
| hypothetical protein | ASC92_00025 | Not Available | + | 6498 - 7133 | 22644.3 |
| recombinase xerc | ASC92_00030 | Not Available | + | 7117 - 8109 | 36206.4 |
| 23s rrna methyltransferase | ASC92_00035 | Not Available | + | 8128 - 9348 | 44148.7 |
| cobalamin biosynthesis protein cobw | ASC92_00040 | Not Available | + | 9458 - 10507 | 39271.8 |
| hypothetical protein | ASC92_00045 | Not Available | - | 10558 - 12099 | 53551.0 |
| hypothetical protein | ASC92_00050 | Not Available | - | 12184 - 12702 | 17541.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.