Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s12 methylthiotransferase rimo | ASC78_19720 | Q12A25 | + | 847640 - 849046 | 50846.5 |
| hypothetical protein | ASC78_19725 | Not Available | - | 849370 - 849648 | 10187.1 |
| hypothetical protein | ASC78_19730 | Not Available | - | 849722 - 850114 | 14512.0 |
| Trna-leu | Not Available | Not Available | + | 850602 - 850686 | Not Available |
| ribonuclease r | ASC78_19740 | P44907 | + | 850767 - 853046 | 84068.4 |
| 3-oxoacyl-acp reductase | ASC78_19745 | Q2UEK6 | + | 853102 - 853866 | 26698.1 |
| carbohydrate kinase | ASC78_19750 | P31806 | - | 853879 - 855333 | 49006.7 |
| amino acid dehydrogenase | ASC78_19755 | A3PRF6 | - | 855403 - 856656 | 44661.9 |
| amidase | ASC78_19760 | Q38M35 | - | 856707 - 858032 | 45767.7 |
| 30s ribosomal protein s2 | ASC78_19765 | C5CKS0 | + | 858253 - 859008 | 27415.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.