Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | ASC78_18950 | Q9CPE0 | + | 690748 - 691455 | 25807.6 |
| Trna-val | Not Available | Not Available | + | 691535 - 691609 | Not Available |
| fad-dependent oxidoreductase | ASC78_18960 | A0A0M7LBC1 | + | 691910 - 693013 | 37953.6 |
| hypothetical protein | ASC78_18965 | Not Available | + | 693157 - 693453 | 10285.3 |
| hypothetical protein | ASC78_18970 | Not Available | + | 693505 - 694233 | 26576.4 |
| dihydroorotate dehydrogenase (quinone) | ASC78_18975 | Q129L9 | - | 694262 - 695347 | 37970.8 |
| ribose 5-phosphate isomerase | ASC78_18980 | Q129M0 | + | 695388 - 696107 | 25036.0 |
| nrdh-redoxin | ASC78_18985 | Not Available | - | 696150 - 696794 | 22527.7 |
| oligopeptidase a | ASC78_18990 | P27237 | - | 696825 - 698873 | 75710.4 |
| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase | ASC78_18995 | C5CXD8 | - | 698879 - 699730 | 29759.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.