Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_18800 | Not Available | + | 649246 - 657597 | 270860.0 |
| abc transporter atp-binding protein | ASC78_18805 | Q03024 | + | 657650 - 659362 | 61031.6 |
| secretion protein hyld | ASC78_18810 | Not Available | + | 659424 - 660761 | 49093.7 |
| hydroperoxidase | ASC78_18815 | Q2SHA6 | + | 660967 - 663150 | 79956.5 |
| hypothetical protein | ASC78_18820 | Not Available | + | 663275 - 663505 | 8427.07 |
| hypothetical protein | ASC78_18825 | Not Available | + | 664595 - 664873 | 9427.06 |
| pp_00605 | ASC78_18830 | Not Available | + | 665457 - 666422 | Not Available |
| iclr family transcriptional regulator | ASC78_18835 | Q6XL52 | + | 666578 - 667363 | 28080.9 |
| gntr family transcriptional regulator | ASC78_18840 | O05494 | - | 667395 - 668042 | 24259.3 |
| methylmalonyl-coa mutase | ASC78_18845 | Q3J4D7 | + | 668171 - 670333 | 77929.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.