Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydromethanopterin reductase | ASC78_18500 | Q8PVV3 | + | 583029 - 583628 | 21617.1 |
| dihydropteroate synthase | ASC78_18505 | Q57571 | + | 583607 - 585097 | 54028.5 |
| tetrahydromethanopterin synthesis protein | ASC78_18510 | Not Available | + | 585094 - 585675 | 21231.7 |
| hypothetical protein | ASC78_18515 | Not Available | + | 585672 - 586376 | 23652.8 |
| hypothetical protein | ASC78_18520 | Q7CGD9 | + | 586829 - 591322 | 144083.0 |
| hypothetical protein | ASC78_18525 | I1WVY3 | + | 591349 - 595566 | 143389.0 |
| hypothetical protein | ASC78_18530 | Not Available | - | 595996 - 596409 | 12893.9 |
| hypothetical protein | ASC78_18535 | Not Available | + | 596399 - 596680 | 10228.1 |
| hypothetical protein | ASC78_18540 | Not Available | + | 596719 - 598446 | 62223.3 |
| hypothetical protein | ASC78_18545 | Not Available | + | 598531 - 599274 | 27082.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.