Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ASC78_02230 | Not Available | + | 485899 - 486639 | 26603.3 |
| abc transporter permease | ASC78_02235 | P21627 | + | 486626 - 487489 | 29256.5 |
| abc transporter permease | ASC78_02240 | Not Available | + | 487486 - 488502 | 36375.9 |
| hypothetical protein | ASC78_02245 | Q47129 | + | 488540 - 489517 | 36294.4 |
| short-chain dehydrogenase | ASC78_02255 | Not Available | - | 491217 - 492041 | 28892.6 |
| nadph:quinone dehydrogenase | ASC78_02260 | Q3J6K9 | - | 492110 - 493096 | 34424.3 |
| tetr family transcriptional regulator | ASC78_02265 | Not Available | - | 493199 - 493798 | 21570.1 |
| hypothetical protein | ASC78_02270 | Not Available | - | 493888 - 494961 | 38786.1 |
| taurine dioxygenase | ASC78_02275 | Not Available | + | 495103 - 495990 | 33102.4 |
| fad-dependent oxidoreductase | ASC78_02280 | Q5BLE8 | + | 496009 - 497613 | 57892.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.