Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | ASC78_02030 | P55604 | + | 440763 - 441824 | 38393.6 |
| hypothetical protein | ASC78_02035 | Not Available | + | 442016 - 442795 | 27533.7 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | ASC78_02040 | Not Available | + | 442814 - 443662 | 30313.2 |
| abc transporter substrate-binding protein | ASC78_02045 | Not Available | + | 444552 - 445544 | 34937.5 |
| asp/glu/hydantoin racemase | ASC78_02050 | O67071 | + | 445569 - 446225 | 23660.9 |
| integrase | ASC78_02055 | Q9PD96 | + | 446485 - 448191 | 62748.9 |
| hypothetical protein | ASC78_02060 | Not Available | - | 448356 - 448874 | 18924.6 |
| hypothetical protein | ASC78_02065 | Not Available | - | 448907 - 449923 | 35429.6 |
| hypothetical protein | ASC78_02070 | Not Available | - | 450069 - 450434 | 12602.1 |
| hypothetical protein | ASC78_02075 | Not Available | - | 450618 - 450830 | 7993.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.